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PMID:27893870 Ordiz MI, Shaikh N, Trehan I, Maleta K, Stauber J, Shulman R, Devaraj S, Tarr PI, Manary MJ. Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs. J Pediatr Gastroenterol Nutr. 2016;63(5):453-459. PMCID:PMC5084633 PMID:27347722 Gasparrini AJ, Crofts TS, Gibson MK, Tarr PI, Warner BB, Dantas G. Antibiotic perturbation of the preterm infant gut microbiome and resistome. Gut Microbes. 2016;7(5):443-9. PMCID:PMC5154371 PMID:27472377 Rusconi B, Sanjar F, Koenig SS, Mammel MK, Tarr PI, Eppinger M. Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks. Front Microbiol. 2016;7:985. PMCID:PMC4928038 PMID:27446025 Planer JD, Peng Y, Kau AL, Blanton LV, Ndao IM, Tarr PI, Warner BB, Gordon JI. Development of the gut microbiota and mucosal IgA responses in twins and gnotobiotic mice. Nature. 2016;534(7606):263-6. 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J Infect Dis. 2015;212(12):1862-8. PMCID:PMC4655851 PMID:25969564 Poindexter BB, Feng R, Schmidt B, Aschner JL, Ballard RA, Hamvas A, Reynolds AM, Shaw PA, Jobe AH, Prematurity and Respiratory Outcomes Program.. Comparisons and Limitations of Current Definitions of Bronchopulmonary Dysplasia for the Prematurity and Respiratory Outcomes Program. Ann Am Thorac Soc. 2015;12(12):1822-30. PMCID:PMC4722827 PMID:26397992 Julian S, Burnham CA, Sellenriek P, Shannon WD, Hamvas A, Tarr PI, Warner BB. Impact of neonatal intensive care bed configuration on rates of late-onset bacterial sepsis and methicillin-resistant Staphylococcus aureus colonization. Infect Control Hosp Epidemiol. 2015;36(10):1173-82. PMCID:PMC5089903 PMID:26108888 Lim ES, Zhou Y, Zhao G, Bauer IK, Droit L, Ndao IM, Warner BB, Tarr PI, Wang D, Holtz LR. Early life dynamics of the human gut virome and bacterial microbiome in infants. Nat Med. 2015;21(10):1228-34. PMCID:PMC4710368 PMID:26366711 Ordiz MI, May TD, Mihindukulasuriya K, Martin J, Crowley J, Tarr PI, Ryan K, Mortimer E, Gopalsamy G, Maleta K, Mitreva M, Young G, Manary MJ. The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children. Microbiome. 2015;3:37. doi:10.1186/s40168-015-0102-9 PMCID:PMC4558878 PMID:26334878 Freedman SB, Lee BE, Louie M, Pang XL, Ali S, Chuck A, Chui L, Currie GR, Dickinson J, Drews SJ, Eltorki M, Graham T, Jiang X, Johnson DW, Kellner J, Lavoie M, MacDonald J, MacDonald S, Svenson LW, Talbot J, Tarr P, Tellier R, Vanderkooi OG. Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE): epidemiology, emerging organisms, and economics. BMC Pediatr. 2015;15:89. PMCID:PMC4521468 PMID:26226953 Qin X, Klein EJ, Galanakis E, Thomas AA, Stapp JR, Rich S, Buccat AM, Tarr PI. Real-Time PCR Assay for Detection and Differentiation of Shiga Toxin-Producing Escherichia coli from Clinical Samples. J Clin Microbiol. 2015;53(7):2148-53. PMCID:PMC4473226 PMID:25926491 Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis. PLoS One. 2015;10(6):e0130902. PMCID:PMC4509574 PMID:26125937 VanDussen KL, Marinshaw JM, Shaikh N, Miyoshi H, Moon C, Tarr PI, Ciorba MA, Stappenbeck TS. Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays. Gut. 2015;64(6):911-20. PMCID:PMC4305344 PMID:25007816 Maitre NL, Ballard RA, Ellenberg JH, Davis SD, Greenberg JM, Hamvas A, Pryhuber GS, Prematurity and Respiratory Outcomes Program. Respiratory consequences of prematurity: evolution of a diagnosis and development of a comprehensive approach. J Perinatol. 2015;35(5):313-21. doi:10.1038/jp.2015.19 PMCID:PMC4414744 PMID:25811285 Pryhuber GS, Maitre NL, Ballard RA, Cifelli D, Davis SD, Ellenberg JH, Greenberg JM, Kemp J, Mariani TJ, Panitch H, Ren C, Shaw P, Taussig LM, Hamvas A, Prematurity and Respiratory Outcomes Program Investigators.. Prematurity and respiratory outcomes program (PROP): study protocol of a prospective multicenter study of respiratory outcomes of preterm infants in the United States. BMC Pediatr. 2015;15:37. PMCID:PMC4407843 PMID:25886363 Kuczius T, Zhang W, Merkel V, Mellmann A, Tarr PI, Karch H. Agitation down-regulates immunoglobulin binding protein EibG expression in Shiga toxin-producing Escherichia coli (STEC). PLoS One. 2015;10(3):e0119583. PMCID:PMC4352079 PMID:25746924 Moore AM, Ahmadi S, Patel S, Gibson MK, Wang B, Ndao MI, Deych E, Shannon W, Tarr PI, Warner BB, Dantas G. Gut resistome development in healthy twin pairs in the first year of life. Microbiome. 2015;3:27. doi:10.1186/s40168-015-0090-9 PMCID:PMC4480905 PMID:26113976 Sommovilla J, Zhou Y, Sun RC, Choi PM, Diaz-Miron J, Shaikh N, Sodergren E, Warner BB, Weinstock GM, Tarr PI, Warner BW. Small bowel resection induces long-term changes in the enteric microbiota of mice. J Gastrointest Surg. 2015;19(1):56-64; discussion 64. PMCID:PMC4576885 PMID:25183407 Zhou Y, Burnham CA, Hink T, Chen L, Shaikh N, Wollam A, Sodergren E, Weinstock GM, Tarr PI, Dubberke ER. Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study. J Clin Microbiol. 2014;52(12):4260-6. PMCID:PMC4313296 PMID:25275005 Schindler EI, Sellenriek P, Storch GA, Tarr PI, Burnham CA. Shiga toxin-producing Escherichia coli: a single-center, 11-year pediatric experience. J Clin Microbiol. 2014;52(10):3647-53. PMCID:PMC4187762 PMID:25078916 La Rosa PS, Warner BB, Zhou Y, Weinstock GM, Sodergren E, Hall-Moore CM, Stevens HJ, Bennett WE Jr, Shaikh N, Linneman LA, Hoffmann JA, Hamvas A, Deych E, Shands BA, Shannon WD, Tarr PI. Patterned progression of bacterial populations in the premature infant gut. Proc Natl Acad Sci U S A. 2014;111(34):12522-7. PMCID:PMC4151715 PMID:25114261 Carl MA, Ndao IM, Springman AC, Manning SD, Johnson JR, Johnston BD, Burnham CA, Weinstock ES, Weinstock GM, Wylie TN, Mitreva M, Abubucker S, Zhou Y, Stevens HJ, Hall-Moore C, Julian S, Shaikh N, Warner BB, Tarr PI. Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections. Clin Infect Dis. 2014;58(9):1211-8. PMCID:PMC3982840 PMID:24647013 Bielaszewska M, Schiller R, Lammers L, Bauwens A, Fruth A, Middendorf B, Schmidt MA, Tarr PI, Dobrindt U, Karch H, Mellmann A. Heteropathogenic virulence and phylogeny reveal phased pathogenic metamorphosis in Escherichia coli O2:H6. EMBO Mol Med. 2014;6(3):347-57. PMCID:PMC3958309 PMID:24413188 Sanjar F, Hazen TH, Shah SM, Koenig SS, Agrawal S, Daugherty S, Sadzewicz L, Tallon LJ, Mammel MK, Feng P, Soderlund R, Tarr PI, Debroy C, Dudley EG, Cebula TA, Ravel J, Fraser CM, Rasko DA, Eppinger M. Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States. Genome Announc. 2014;2(1). PMCID:PMC3886948 PMID:24407635 Gurnee EA, Ndao IM, McGhee JE, Warner BB, Tarr PI, Fritz SA, Burnham CA. Fecal carriage of methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus in healthy children. Antimicrob Agents Chemother. 2014;58(2):1261-2. PMCID:PMC3910844 PMID:24277049 Turabelidze G, Lawrence SJ, Gao H, Sodergren E, Weinstock GM, Abubucker S, Wylie T, Mitreva M, Shaikh N, Gautom R, Tarr PI. Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis. J Clin Microbiol. 2013;51(12):3950-4. PMCID:PMC3838074 PMID:24048526 El Feghaly RE, Stauber JL, Tarr PI, Haslam DB. Viral co-infections are common and are associated with higher bacterial burden in children with clostridium difficile infection. J Pediatr Gastroenterol Nutr. 2013;57(6):813-6. PMCID:PMC4098970 PMID:23838821 El Feghaly RE, Stauber JL, Tarr PI, Haslam DB. Intestinal inflammatory biomarkers and outcome in pediatric Clostridium difficile infections. J Pediatr. 2013;163(6):1697-1704.e2. PMCID:PMC4098967 PMID:24011765 Moore AM, Patel S, Forsberg KJ, Wang B, Bentley G, Razia Y, Qin X, Tarr PI, Dantas G. Pediatric fecal microbiota harbor diverse and novel antibiotic resistance genes. PLoS One. 2013;8(11):e78822. PMCID:PMC3827270 PMID:24236055 Schnadower D, Tarr PI, Gorelick MH, O'Connell K, Roskind CG, Powell EC, Rao J, Bhatt S, Freedman SB. Validation of the modified Vesikari score in children with gastroenteritis in 5 US emergency departments. J Pediatr Gastroenterol Nutr. 2013;57(4):514-9. PMCID:PMC3788842 PMID:23676445 Page AV, Tarr PI, Watkins SL, Rajwans N, Petruzziello-Pellegrini TN, Marsden PA, Kain KC, Liles WC. Dysregulation of angiopoietin 1 and 2 in Escherichia coli O157:H7 infection and the hemolytic-uremic syndrome. J Infect Dis. 2013;208(6):929-33. PMCID:PMC3749007 PMID:23801605 Melamed R, Storch GA, Warner BB, Tarr PI. Gastrointestinal viruses were not found as an aetiology of culture-negative illness in NICU patients. Arch Dis Child Fetal Neonatal Ed. 2013;98(4):F374-5. PMID:23563694 El Feghaly RE, Stauber JL, Deych E, Gonzalez C, Tarr PI, Haslam DB. Markers of intestinal inflammation, not bacterial burden, correlate with clinical outcomes in Clostridium difficile infection. Clin Infect Dis. 2013;56(12):1713-21. PMCID:PMC3707425 PMID:23487367 Eppinger M, Daugherty S, Agrawal S, Galens K, Sengamalay N, Sadzewicz L, Tallon L, Cebula TA, Mammel MK, Feng P, Soderlund R, Tarr PI, Debroy C, Dudley EG, Fraser CM, Ravel J. Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains. Genome Announc. 2013;1(2):e0013412. PMCID:PMC3593324 PMID:23516226 Zhou Y, Gao H, Mihindukulasuriya KA, La Rosa PS, Wylie KM, Vishnivetskaya T, Podar M, Warner B, Tarr PI, Nelson DE, Fortenberry JD, Holland MJ, Burr SE, Shannon WD, Sodergren E, Weinstock GM. Biogeography of the ecosystems of the healthy human body. Genome Biol. 2013;14(1):R1. PMCID:PMC4054670 PMID:23316946 Saito JM, Yan Y, Evashwick TW, Warner BW, Tarr PI. Use and accuracy of diagnostic imaging by hospital type in pediatric appendicitis. Pediatrics. 2013;131(1):e37-44. PMCID:PMC3529953 PMID:23266930 Agapova S, Stephenson K, Manary M, Weisz A, Tarr PI, Mkakosya R, Maleta K, Shulman RJ, Manary M, Shaikh N. 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J Perinatol. 2011;31(8):519-23. PMCID:PMC3145821 PMID:21273988 Leopold SR, Sawyer SA, Whittam TS, Tarr PI. Obscured phylogeny and possible recombinational dormancy in Escherichia coli. BMC Evol Biol. 2011;11:183. PMCID:PMC3152902 PMID:21708031 Bucher BT, McDuffie LA, Shaikh N, Tarr PI, Warner BB, Hamvas A, White FV, Erwin CR, Warner BW. Bacterial DNA content in the intestinal wall from infants with necrotizing enterocolitis. J Pediatr Surg. 2011;46(6):1029-33. PMCID:PMC3118995 PMID:21683193 Brockmeyer J, Aldick T, Soltwisch J, Zhang W, Tarr PI, Weiss A, Dreisewerd K, Müthing J, Bielaszewska M, Karch H. Enterohaemorrhagic Escherichia coli haemolysin is cleaved and inactivated by serine protease EspPα. Environ Microbiol. 2011;13(5):1327-41. PMCID:PMC3472028 PMID:21352460 Bielaszewska M, Middendorf B, Tarr PI, Zhang W, Prager R, Aldick T, Dobrindt U, Karch H, Mellmann A. 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PMCID:PMC3023602 PMID:21327027 Laiko M, Murtazina R, Malyukova I, Zhu C, Boedeker EC, Gutsal O, O'Malley R, Cole RN, Tarr PI, Murray KF, Kane A, Donowitz M, Kovbasnjuk O. Shiga toxin 1 interaction with enterocytes causes apical protein mistargeting through the depletion of intracellular galectin-3. Exp Cell Res. 2010;316(4):657-66. PMCID:PMC2815162 PMID:19744479 Ahn CK, Russo AJ, Howell KR, Holt NJ, Sellenriek PL, Rothbaum RJ, Beck AM, Luebbering LJ, Tarr PI. Deer sausage: a newly identified vehicle of transmission of Escherichia coli O157:H7. J Pediatr. 2009;155(4):587-9. PMID:19773004 Bennett WE Jr, González-Rivera R, Shaikh N, Magrini V, Boykin M, Warner BB, Hamvas A, Tarr PI. A method for isolating and analyzing human mRNA from newborn stool. J Immunol Methods. 2009;349(1-2):56-60. PMCID:PMC2850193 PMID:19660464 Samadder P, Xicohtencatl-Cortes J, Saldaña Z, Jordan D, Tarr PI, Kaper JB, Girón JA. 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J Infect Dis. 2009;199(4):467-76. PMCID:PMC3693595 PMID:19281302 Bielaszewska M, Prager R, Vandivinit L, Müsken A, Mellmann A, Holt NJ, Tarr PI, Karch H, Zhang W. Detection and characterization of the fimbrial sfp cluster in enterohemorrhagic Escherichia coli O165:H25/NM isolates from humans and cattle. Appl Environ Microbiol. 2009;75(1):64-71. PMCID:PMC2612197 PMID:18978078 Qin X, Zerr DM, Weissman SJ, Englund JA, Denno DM, Klein EJ, Tarr PI, Kwong J, Stapp JR, Tulloch LG, Galanakis E. Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience. Antimicrob Agents Chemother. 2008;52(11):3909-14. PMCID:PMC2573145 PMID:18765688 Bhutta ZA, Nelson EA, Lee WS, Tarr PI, Zablah R, Phua KB, Lindley K, Bass D, Phillips A, Persistent Diarrhea Working Group.. Recent advances and evidence gaps in persistent diarrhea. J Pediatr Gastroenterol Nutr. 2008;47(2):260-5. PMID:18664885 Hill J, Beriwal S, Chandra I, Paul VK, Kapil A, Singh T, Wadowsky RM, Singh V, Goyal A, Jahnukainen T, Johnson JR, Tarr PI, Vats A. Loop-mediated isothermal amplification assay for rapid detection of common strains of Escherichia coli. J Clin Microbiol. 2008;46(8):2800-4. PMCID:PMC2519505 PMID:18550738 Cobbold RN, Davis MA, Rice DH, Szymanski M, Tarr PI, Besser TE, Hancock DD. Associations between bovine, human, and raw milk, and beef isolates of non-O157 Shiga toxigenic Escherichia coli within a restricted geographic area of the United States. J Food Prot. 2008;71(5):1023-7. PMID:18522040 Finkbeiner SR, Allred AF, Tarr PI, Klein EJ, Kirkwood CD, Wang D. Metagenomic analysis of human diarrhea: viral detection and discovery. PLoS Pathog. 2008;4(2):e1000011. PMCID:PMC2290972 PMID:18398449 Shaikh N, Holt NJ, Johnson JR, Tarr PI. Fim operon variation in the emergence of Enterohemorrhagic Escherichia coli: an evolutionary and functional analysis. FEMS Microbiol Lett. 2007;273(1):58-63. PMID:17559392 Bielaszewska M, Prager R, Köck R, Mellmann A, Zhang W, Tschäpe H, Tarr PI, Karch H. Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans. Appl Environ Microbiol. 2007;73(10):3144-50. PMCID:PMC1907125 PMID:17400784 Besser TE, Shaikh N, Holt NJ, Tarr PI, Konkel ME, Malik-Kale P, Walsh CW, Whittam TS, Bono JL. Greater diversity of Shiga toxin-encoding bacteriophage insertion sites among Escherichia coli O157:H7 isolates from cattle than in those from humans. Appl Environ Microbiol. 2007;73(3):671-9. PMCID:PMC1800756 PMID:17142358 Rashid RA, Tarr PI, Moseley SL. Expression of the Escherichia coli IrgA homolog adhesin is regulated by the ferric uptake regulation protein. Microb Pathog. 2006;41(6):207-17. PMCID:PMC2039900 PMID:16954050 Klein EJ, Boster DR, Stapp JR, Wells JG, Qin X, Clausen CR, Swerdlow DL, Braden CR, Tarr PI. Diarrhea etiology in a Children's Hospital Emergency Department: a prospective cohort study. Clin Infect Dis. 2006;43(7):807-13. PMID:16941358 Qin X, Razia Y, Johnson JR, Stapp JR, Boster DR, Tsosie T, Smith DL, Braden CR, Gay K, Angulo FJ, Tarr PI. Ciprofloxacin-resistant gram-negative bacilli in the fecal microflora of children. Antimicrob Agents Chemother. 2006;50(10):3325-9. PMCID:PMC1610095 PMID:17005812 Kudva IT, Krastins B, Sheng H, Griffin RW, Sarracino DA, Tarr PI, Hovde CJ, Calderwood SB, John M. Proteomics-based expression library screening (PELS): a novel method for rapidly defining microbial immunoproteomes. Mol Cell Proteomics. 2006;5(8):1514-9. PMCID:PMC2754196 PMID:16737953 Rashid RA, Tabata TA, Oatley MJ, Besser TE, Tarr PI, Moseley SL. Expression of putative virulence factors of Escherichia coli O157:H7 differs in bovine and human infections. Infect Immun. 2006;74(7):4142-8. PMCID:PMC1489682 PMID:16790788 Ståhl AL, Svensson M, Mörgelin M, Svanborg C, Tarr PI, Mooney JC, Watkins SL, Johnson R, Karpman D. Lipopolysaccharide from enterohemorrhagic Escherichia coli binds to platelets through TLR4 and CD62 and is detected on circulating platelets in patients with hemolytic uremic syndrome. Blood. 2006;108(1):167-76. PMCID:PMC1895830 PMID:16514062 Bielaszewska M, Zhang W, Tarr PI, Sonntag AK, Karch H. Molecular profiling and phenotype analysis of Escherichia coli O26:H11 and O26:NM: secular and geographic consistency of enterohemorrhagic and enteropathogenic isolates. J Clin Microbiol. 2005;43(8):4225-8. PMCID:PMC1233958 PMID:16081985 Ake JA, Jelacic S, Ciol MA, Watkins SL, Murray KF, Christie DL, Klein EJ, Tarr PI. Relative nephroprotection during Escherichia coli O157:H7 infections: association with intravenous volume expansion. Pediatrics. 2005;115(6):e673-80. PMID:15930195 John M, Kudva IT, Griffin RW, Dodson AW, McManus B, Krastins B, Sarracino D, Progulske-Fox A, Hillman JD, Handfield M, Tarr PI, Calderwood SB. Use of in vivo-induced antigen technology for identification of Escherichia coli O157:H7 proteins expressed during human infection. Infect Immun. 2005;73(5):2665-79. PMCID:PMC1087376 PMID:15845468 Denno DM, Stapp JR, Boster DR, Qin X, Clausen CR, Del Beccaro KH, Swerdlow DL, Braden CR, Tarr PI. Etiology of diarrhea in pediatric outpatient settings. Pediatr Infect Dis J. 2005;24(2):142-8. PMID:15702043 Johnson JR, Jelacic S, Schoening LM, Clabots C, Shaikh N, Mobley HL, Tarr PI. The IrgA homologue adhesin Iha is an Escherichia coli virulence factor in murine urinary tract infection. Infect Immun. 2005;73(2):965-71. PMCID:PMC546986 PMID:15664939 Bielaszewska M, Tarr PI, Karch H, Zhang W, Mathys W. Phenotypic and molecular analysis of tellurite resistance among enterohemorrhagic Escherichia coli O157:H7 and sorbitol-fermenting O157:NM clinical isolates. J Clin Microbiol. 2005;43(1):452-4. PMCID:PMC540173 PMID:15635013 Klein EJ, Stapp JR, Neill MA, Besser JM, Osterholm MT, Tarr PI. Shiga toxin antigen detection should not replace sorbitol MacConkey agar screening of stool specimens. J Clin Microbiol. 2004;42(9):4416; author reply 4416-7. doi:10.1128/JCM.42.9.4416-4417.2004 PMCID:PMC516334 PMID:15365063 Haack JP, Jelacic S, Besser TE, Weinberger E, Kirk DJ, McKee GL, Harrison SM, Musgrave KJ, Miller G, Price TH, Tarr PI. Escherichia coli O157 exposure in Wyoming and Seattle: serologic evidence of rural risk. Emerg Infect Dis. 2003;9(10):1226-31. doi:10.3201/eid0910.020254 PMCID:PMC3033090 PMID:14609456 Jelacic JK, Damrow T, Chen GS, Jelacic S, Bielaszewska M, Ciol M, Carvalho HM, Melton-Celsa AR, O'Brien AD, Tarr PI. Shiga toxin-producing Escherichia coli in Montana: bacterial genotypes and clinical profiles. J Infect Dis. 2003;188(5):719-29. doi:10.1086/376999 PMID:12934188 Johnson JR, Lockman HA, Owens K, Jelacic S, Tarr PI. High-frequency secondary mutations after suicide-driven allelic exchange mutagenesis in extraintestinal pathogenic Escherichia coli. J Bacteriol. 2003;185(17):5301-5. PMCID:PMC180995 PMID:12923106 Shaikh N, Tarr PI. Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications. J Bacteriol. 2003;185(12):3596-605. PMCID:PMC156235 PMID:12775697 Albaqali A, Ghuloom A, Al Arrayed A, Al Ajami A, Shome DK, Jamsheer A, Al Mahroos H, Jelacic S, Tarr PI, Kaplan BS, Dhiman RK. Hemolytic uremic syndrome in association with typhoid fever. Am J Kidney Dis. 2003;41(3):709-13. doi:10.1053/ajkd.2003.50135 PMID:12612998 Thayu M, Chandler WL, Jelacic S, Gordon CA, Rosenthal GL, Tarr PI. Cardiac ischemia during hemolytic uremic syndrome. Pediatr Nephrol. 2003;18(3):286-9. doi:10.1007/s00467-002-1039-3 PMID:12644926 López-Saucedo C, Cerna JF, Villegas-Sepulveda N, Thompson R, Velazquez FR, Torres J, Tarr PI, Estrada-García T. Single multiplex polymerase chain reaction to detect diverse loci associated with diarrheagenic Escherichia coli. Emerg Infect Dis. 2003;9(1):127-31. doi:10.3201/eid0901.010507 PMCID:PMC2873745 PMID:12533296 Smith JM, Jones F, Ciol MA, Jelacic S, Boster DR, Watkins SL, Williams GD, Tarr PI, Henderson WR Jr. Platelet-activating factor and Escherichia coliO157:H7 infections. Pediatr Nephrol. 2002;17(12):1047-52. PMID:12478356 Tarr CL, Large TM, Moeller CL, Lacher DW, Tarr PI, Acheson DW, Whittam TS. Molecular characterization of a serotype O121:H19 clone, a distinct Shiga toxin-producing clone of pathogenic Escherichia coli. Infect Immun. 2002;70(12):6853-9. PMCID:PMC133070 PMID:12438362 Klein EJ, Stapp JR, Clausen CR, Boster DR, Wells JG, Qin X, Swerdlow DL, Tarr PI. Shiga toxin-producing Escherichia coli in children with diarrhea: a prospective point-of-care study. J Pediatr. 2002;141(2):172-7. PMID:12183710 Lathem WW, Grys TE, Witowski SE, Torres AG, Kaper JB, Tarr PI, Welch RA. StcE, a metalloprotease secreted by Escherichia coli O157:H7, specifically cleaves C1 esterase inhibitor. Mol Microbiol. 2002;45(2):277-88. PMID:12123444 Cornick NA, Jelacic S, Ciol MA, Tarr PI. Escherichia coli O157:H7 infections: discordance between filterable fecal shiga toxin and disease outcome. J Infect Dis. 2002;186(1):57-63. PMID:12089662 Johnson JR, Jerome C, Boster DR, Stapleton AE, Tarr PI. Analysis of urinary Escherichia coli isolates for ability to produce Shiga toxin. J Clin Microbiol. 2002;40(6):2247-8. PMCID:PMC130820 PMID:12037099 Jelacic S, Wobbe CL, Boster DR, Ciol MA, Watkins SL, Tarr PI, Stapleton AE. ABO and P1 blood group antigen expression and stx genotype and outcome of childhood Escherichia coli O157:H7 infections. J Infect Dis. 2002;185(2):214-9. PMID:11807695 Chandler WL, Jelacic S, Boster DR, Ciol MA, Williams GD, Watkins SL, Igarashi T, Tarr PI. Prothrombotic coagulation abnormalities preceding the hemolytic-uremic syndrome. N Engl J Med. 2002;346(1):23-32. PMID:11777999 Schmidt H, Zhang WL, Hemmrich U, Jelacic S, Brunder W, Tarr PI, Dobrindt U, Hacker J, Karch H. Identification and characterization of a novel genomic island integrated at selC in locus of enterocyte effacement-negative, Shiga toxin-producing Escherichia coli. Infect Immun. 2001;69(11):6863-73. PMCID:PMC100065 PMID:11598060 Sprouse JT, Wong CS, Chandler WL, Williams GD, Watkins SL, Tarr PI. Thrombogenic alleles, Escherichia coli O157:H7 infections, and hemolytic uremic syndrome. Blood Coagul Fibrinolysis. 2001;12(4):283-8. PMID:11460012 Tsai HM, Chandler WL, Sarode R, Hoffman R, Jelacic S, Habeeb RL, Watkins SL, Wong CS, Williams GD, Tarr PI. von Willebrand factor and von Willebrand factor-cleaving metalloprotease activity in Escherichia coli O157:H7-associated hemolytic uremic syndrome. Pediatr Res. 2001;49(5):653-9. PMID:11328948 Tarr PI, Schoening LM, Yea YL, Ward TR, Jelacic S, Whittam TS. Acquisition of the rfb-gnd cluster in evolution of Escherichia coli O55 and O157. J Bacteriol. 2000;182(21):6183-91. PMCID:PMC94755 PMID:11029441 Stapp JR, Jelacic S, Yea YL, Klein EJ, Fischer M, Clausen CR, Qin X, Swerdlow DL, Tarr PI. Comparison of Escherichia coli O157:H7 antigen detection in stool and broth cultures to that in sorbitol-MacConkey agar stool cultures. J Clin Microbiol. 2000;38(9):3404-6. PMCID:PMC87394 PMID:10970391 Wong CS, Jelacic S, Habeeb RL, Watkins SL, Tarr PI. The risk of the hemolytic-uremic syndrome after antibiotic treatment of Escherichia coli O157:H7 infections. N Engl J Med. 2000;342(26):1930-6. PMCID:PMC3659814 PMID:10874060 Johnson JR, Russo TA, Tarr PI, Carlino U, Bilge SS, Vary JC Jr, Stell AL. Molecular epidemiological and phylogenetic associations of two novel putative virulence genes, iha and iroN(E. coli), among Escherichia coli isolates from patients with urosepsis. Infect Immun. 2000;68(5):3040-7. PMCID:PMC97527 PMID:10769012 Tarr PI, Bilge SS, Vary JC Jr, Jelacic S, Habeeb RL, Ward TR, Baylor MR, Besser TE. Iha: a novel Escherichia coli O157:H7 adherence-conferring molecule encoded on a recently acquired chromosomal island of conserved structure. Infect Immun. 2000;68(3):1400-7. PMCID:PMC97294 PMID:10678953 Lee DK, Tarr PI, Haigh WG, Lee SP. Bacterial DNA in mixed cholesterol gallstones. Am J Gastroenterol. 1999;94(12):3502-6. PMID:10606311 Kudva IT, Jelacic S, Tarr PI, Youderian P, Hovde CJ. Biocontrol of Escherichia coli O157 with O157-specific bacteriophages. Appl Environ Microbiol. 1999;65(9):3767-73. PMCID:PMC99698 PMID:10473373 Tarr PI, Tran NT, Wilson RA. Escherichia coli O157:H7 in retail ground beef in Seattle: results of a one-year prospective study. J Food Prot. 1999;62(2):133-9. PMID:10030631 Schmidt H, Geitz C, Tarr PI, Frosch M, Karch H. Non-O157:H7 pathogenic Shiga toxin-producing Escherichia coli: phenotypic and genetic profiling of virulence traits and evidence for clonality. J Infect Dis. 1999;179(1):115-23. PMID:9841830 Su C, Brandt LJ, Sigal SH, Alt E, Steinberg JJ, Patterson K, Tarr PI. The immunohistological diagnosis of E. coli O157:H7 colitis: possible association with colonic ischemia. Am J Gastroenterol. 1998;93(7):1055-9. PMID:9672329 Tarr PI, Clausen CR, Whittam TS, Wilson RA. Antibiotic resistance and O antigen expression in Escherichia coli. J Infect Dis. 1998;177(6):1774-5. PMID:9607874 Desmarchelier PM, Bilge SS, Fegan N, Mills L, Vary JC Jr, Tarr PI. A PCR specific for Escherichia coli O157 based on the rfb locus encoding O157 lipopolysaccharide. J Clin Microbiol. 1998;36(6):1801-4. PMCID:PMC104928 PMID:9620428 Brandt JR, Joseph MW, Fouser LS, Tarr PI, Zelikovic I, McDonald RA, Avner ED, McAfee NG, Watkins SL. Cholelithiasis following Escherichia coli O157:H7-associated hemolytic uremic syndrome. Pediatr Nephrol. 1998;12(3):222-5. PMID:9630042 Bell BP, Griffin PM, Lozano P, Christie DL, Kobayashi JM, Tarr PI. Predictors of hemolytic uremic syndrome in children during a large outbreak of Escherichia coli O157:H7 infections. Pediatrics. 1997;100(1):E12. PMID:9200386 Bokete TN, Whittam TS, Wilson RA, Clausen CR, O'Callahan CM, Moseley SL, Fritsche TR, Tarr PI. Genetic and phenotypic analysis of Escherichia coli with enteropathogenic characteristics isolated from Seattle children. J Infect Dis. 1997;175(6):1382-9. PMID:9180177 Hancock DD, Besser TE, Rice DH, Herriott DE, Tarr PI. A longitudinal study of Escherichia coli O157 in fourteen cattle herds. Epidemiol Infect. 1997;118(2):193-5. PMCID:PMC2808780 PMID:9129597 Besser TE, Hancock DD, Pritchett LC, McRae EM, Rice DH, Tarr PI. Duration of detection of fecal excretion of Escherichia coli O157:H7 in cattle. J Infect Dis. 1997;175(3):726-9. PMID:9041355 Bilge SS, Vary JC Jr, Dowell SF, Tarr PI. Role of the Escherichia coli O157:H7 O side chain in adherence and analysis of an rfb locus. Infect Immun. 1996;64(11):4795-801. PMCID:PMC174447 PMID:8890241 Tarr PI, Fouser LS, Stapleton AE, Wilson RA, Kim HH, Vary JC Jr, Clausen CR. Hemolytic-uremic syndrome in a six-year-old girl after a urinary tract infection with Shiga-toxin-producing Escherichia coli O103:H2. N Engl J Med. 1996;335(9):635-8. PMID:8687518 Tarr PI, Haas JE, Christie DL. Biliary atresia, cytomegalovirus, and age at referral. Pediatrics. 1996;97(6 Pt 1):828-31. PMID:8657522 Bensen ES, Jaffe KM, Tarr PI. Acute gastric dilatation in Duchenne muscular dystrophy: a case report and review of the literature. Arch Phys Med Rehabil. 1996;77(5):512-4. PMID:8629931 Grimm LM, Goldoft M, Kobayashi J, Lewis JH, Alfi D, Perdichizzi AM, Tarr PI, Ongerth JE, Moseley SL, Samadpour M. Molecular epidemiology of a fast-food restaurant-associated outbreak of Escherichia coli O157:H7 in Washington State. J Clin Microbiol. 1995;33(8):2155-8. PMCID:PMC228354 PMID:7559967 Kim HH, Samadpour M, Grimm L, Clausen CR, Besser TE, Baylor M, Kobayashi JM, Neill MA, Schoenknecht FD, Tarr PI. Characteristics of antibiotic-resistant Escherichia coli O157:H7 in Washington State, 1984-1991. J Infect Dis. 1994;170(6):1606-9. PMID:7996005 Bell BP, Goldoft M, Griffin PM, Davis MA, Gordon DC, Tarr PI, Bartleson CA, Lewis JH, Barrett TJ, Wells JG. A multistate outbreak of Escherichia coli O157:H7-associated bloody diarrhea and hemolytic uremic syndrome from hamburgers. The Washington experience. JAMA. 1994;272(17):1349-53. PMID:7933395 Cox GJ, Matsui SM, Lo RS, Hinds M, Bowden RA, Hackman RC, Meyer WG, Mori M, Tarr PI, Oshiro LS. Etiology and outcome of diarrhea after marrow transplantation: a prospective study. Gastroenterology. 1994;107(5):1398-407. PMID:7926504 Brandt JR, Fouser LS, Watkins SL, Zelikovic I, Tarr PI, Nazar-Stewart V, Avner ED. Escherichia coli O 157:H7-associated hemolytic-uremic syndrome after ingestion of contaminated hamburgers. J Pediatr. 1994;125(4):519-26. PMID:7931869 Hancock DD, Besser TE, Kinsel ML, Tarr PI, Rice DH, Paros MG. The prevalence of Escherichia coli O157.H7 in dairy and beef cattle in Washington State. Epidemiol Infect. 1994;113(2):199-207. PMCID:PMC2271540 PMID:7925659 Tarr PI. "4+ normal flora" (or is it?) J Pediatr Gastroenterol Nutr. 1994;19(2):145-7. PMID:7815234 Samadpour M, Ongerth JE, Liston J, Tran N, Nguyen D, Whittam TS, Wilson RA, Tarr PI. Occurrence of Shiga-like toxin-producing Escherichia coli in retail fresh seafood, beef, lamb, pork, and poultry from grocery stores in Seattle, Washington. Appl Environ Microbiol. 1994;60(3):1038-40. PMCID:PMC201431 PMID:8161171 Samadpour M, Grimm LM, Desai B, Alfi D, Ongerth JE, Tarr PI. Molecular epidemiology of Escherichia coli O157:H7 strains by bacteriophage lambda restriction fragment length polymorphism analysis: application to a multistate foodborne outbreak and a day-care center cluster. J Clin Microbiol. 1993;31(12):3179-83. PMCID:PMC266372 PMID:7905882 Bokete TN, O'Callahan CM, Clausen CR, Tang NM, Tran N, Moseley SL, Fritsche TR, Tarr PI. Shiga-like toxin-producing Escherichia coli in Seattle children: a prospective study. Gastroenterology. 1993;105(6):1724-31. PMID:8253349 Paros M, Tarr PI, Kim H, Besser TE, Hancock DD. A comparison of human and bovine Escherichia coli O157:H7 isolates by toxin genotype, plasmid profile, and bacteriophage lambda-restriction fragment length polymorphism profile. J Infect Dis. 1993;168(5):1300-3. PMID:8053998 Tarr PI, Weinberger E, Hatch EI Jr, Christie DL. Bacterial ileocecitis caused by Escherichia coli O157:H7. J Pediatr Gastroenterol Nutr. 1992;14(3):261-3. PMID:1619529 Montgomery KF, Osborn L, Hession C, Tizard R, Goff D, Vassallo C, Tarr PI, Bomsztyk K, Lobb R, Harlan JM. Activation of endothelial-leukocyte adhesion molecule 1 (ELAM-1) gene transcription. Proc Natl Acad Sci U S A. 1991;88(15):6523-7. PMCID:PMC52118 PMID:1713680 Tarr PI, Neill MA, Clausen CR, Watkins SL, Christie DL, Hickman RO. Escherichia coli O157:H7 and the hemolytic uremic syndrome: importance of early cultures in establishing the etiology. J Infect Dis. 1990;162(2):553-6. PMID:2197346 Samadpour M, Liston J, Ongerth JE, Tarr PI. Evaluation of DNA probes for detection of Shiga-like-toxin-producing Escherichia coli in food and calf fecal samples. Appl Environ Microbiol. 1990;56(5):1212-5. PMCID:PMC184384 PMID:2187410 Ostroff SM, Tarr PI, Neill MA, Lewis JH, Hargrett-Bean N, Kobayashi JM. Toxin genotypes and plasmid profiles as determinants of systemic sequelae in Escherichia coli O157:H7 infections. J Infect Dis. 1989;160(6):994-8. PMID:2685131 Tarr PI, Neill MA, Allen J, Siccardi CJ, Watkins SL, Hickman RO. The increasing incidence of the hemolytic-uremic syndrome in King County, Washington: lack of evidence for ascertainment bias. Am J Epidemiol. 1989;129(3):582-6. PMID:2916551 Tarr PI, Neill MA, Clausen CR, Newland JW, Neill RJ, Moseley SL. Genotypic variation in pathogenic Escherichia coli O157:H7 isolated from patients in Washington, 1984-1987. J Infect Dis. 1989;159(2):344-7. PMID:2644374 Tarr PI, Aline RF Jr, Smiley BL, Scholler J, Keithly J, Stuart K. LR1: a candidate RNA virus of Leishmania. Proc Natl Acad Sci U S A. 1988;85(24):9572-5. PMCID:PMC282800 PMID:3200841 Tarr PI, Hickman RO. Hemolytic uremic syndrome epidemiology: a population-based study in King County, Washington, 1971 to 1980. Pediatrics. 1987;80(1):41-5. PMID:3601516 Neill MA, Tarr PI, Clausen CR, Christie DL, Hickman RO. Escherichia coli O157:H7 as the predominant pathogen associated with the hemolytic uremic syndrome: a prospective study in the Pacific Northwest. Pediatrics. 1987;80(1):37-40. PMID:3299236 Tarr PI, Hosea SW, Brown EJ, Schneerson R, Sutton A, Frank MM. The requirement of specific anticapsular IgG for killing of Haemophilus influenzae by the alternative pathway of complement activation. J Immunol. 1982;128(4):1772-5. PMID:6977569 Wright K, Tarr PI, Hickman RO, Guthrie RD. Hyperbilirubinemia secondary to delayed absorption of intraperitoneal blood following intrauterine transfusion. J Pediatr. 1982;100(2):302-4. PMID:7199084 Tarr PI, Peter G. Demographic factors in the epidemiology of hemophilus influenzae meningitis in young children. J Pediatr. 1978;92(6):884-8. PMID:660353 Riley ID, Tarr PI, Andrews M, Pfeiffer M, Howard R, Challands P, Jennison G. Immunisation with a polyvalent pneumococcal vaccine. Reduction of adult respiratory mortality in a New Guinea Highlands community. Lancet. 1977;1(8026):1338-41. PMID:69058 Lee YH, Tarr PI, Schumacher JR, Rosner B, Alpert S, McCormack WM. Reevaluation of the role of T-mycoplasmas in nongonococcal urethritis. J Am Vener Dis Assoc. 1976;3(1):25-8. PMID:1010763 Tarr PI, Lee YH, Alpert S, Schumacher JR, Zinner SH, McCormack WM. Comparison of methods for the isolation of genital mycoplasmas from men. J Infect Dis. 1976;133(4):419-23. PMID:772129 Simon HB, Tarr PI, Hutter AM Jr, Erdmann AJ 3rd. Primary meningococcal pericarditis. Diagnosis by counter-current immunoelectrophoresis. JAMA. 1976;235(3):278-80. PMID:811823 Duanćić A, Fiumara NJ, Alpert S, Lee YH, Tarr PI, Rosner B, McCormack WM. Comparison of spectinomycin hydrochloride and aqueous procaine penicillin G in the treatment of uncomplicated gonorrhea. Antimicrob Agents Chemother. 1974;6(4):512-5. PMCID:PMC444681 PMID:4157355 Anderson NW, Tarr PI. Multiplex nucleic acid amplification testing to diagnose gut infections: challenges, opportunities, and result interpretation Gastroenterology Clinics.
Tarr GAM, Shringi S, Oltean HN, Mayer J, Rabinowitz P, Wakefield J, Tarr PI, Besser TE, Phipps AI. Importance of Case Age in the Purported Association between Phylogenetics and Hemolytic Uremic Syndrome in Escherichia coli O157:H7 Infections Epidemiology and Infection.